Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920834.1_cds_XP_016469894.1_62398
CDS Infomation

[gene=LOC107792215] [db_xref=GeneID:107792215] [protein=oxysterol-binding protein-related protein 2A isoform X2] [protein_id=XP_016469894.1] [location=join(63565..63604,64943..65331,66060..66215,67252..67419,67526..67666,67801..68022,68125..68238,69026..69205)] [gbkey=CDS]
Sequence

ATGAAGCAACTCTCCAGTTTAGGGCGTGGCAAGTACAGCGAATGGAGTACGACTGAATCG
TCCGATGATATTGAGAAACAAGAGCTTGATGAAGCGTCAGATGAAGAGGAAGCCAATTAT
CTTGACGCAAATGAATGTTTCTCTGAACTTCATTTATCTGGTGGGTCAGTAGTTGTGGAC
CACATGGCAAGCAGTACCATTGATGCATCTGCACATGCACAAGTTACACGCAGAACGAAG
CTGCCGGATCCAGTTGAAAAAGAGAAAGGGGTTAGTCTTTGGTCTATGATCAAAGACAAC
GTTGGGAAAGATCTAACACGAGTTTGCCTGCCAGTGTATTTCAATGAGCCATTGTCGTCC
CTGCAAAAATGCTTCGAAGATTTAGAGTACTCATATCTCTTAGATAGAGCATACGAACAT
GGAAAATCGGGGAACAGCCTTTTAAGAATTCTAAATGTTGCTGCTTTTGCTGTCTCTGGT
TATGCTTCAACTGAAGGCCGGAACTGTAAACCTTTCAATCCTTTGCTTGGAGAAACTTTT
GAAGCTGATTTTCCTGAGAAAGGAATCCGCTTTTTCTCTGAGAAGGTTAGTCACCACCCA
ACACTTATTGCCTGTCACTGTGAAGGTAGAGGATGGAAATTCTGGGCTGACAGTAATCTT
AAGTCAAAATTTTGGGGAAGGTCAATTCAACTTGATCCTGTTGGAACATTAACATTAGAA
TTCGACGATGGAGAGATCTTTCAGTGGAGCAAGGTCACGACAAGTATCTACAATCTTATC
CTTGGTAAGATATATTGTGATCATCATGGAATAATGCATATACGTGGCAATCATCAGAAC
TCATGCAAGCTCAAGTTCAAAGAGCCATCCATTATCGAGCGTAATCCTCATCAGGTTCAT
GGATTTGTTGAAGATGTCTCCGGGAAAAAAGTTGCAACATTATTCGGAAAATGGAATGAG
AACATGTACTATATGAATGGAGAATGGACCAGCAAGCCTAAGGATTTATCTGATTCAGCT
TTATTGTGGACAAGGAATAAGCCACCCCTAAATCTAACTCGATACAACTTGTCTTCTTTT
GCAATTACACTGAATGAGTTAACACCAGGACTTGAGGAGAAGCTCCCACCTACAGATTCA
AGACTCAGACCTGATCAGCGACATCTGGAGAATGGGGAATACGACAAGGCAAATTCAGAG
AAGTTGCGGTTAGAGACACGACAGAGAATGTCCAGGAAATTGCAAGAGAATGGTTGGAGA
CCGCGATGGTTTCAAAGAGAAGGTGAAGATGGGACTTTCCGGTATACCGGTGGTTACTGG
GAGGCAAGAGAGATGGGTACTTGGGATGGCTGCCCAAATATTTTTGGTGAGATTGATCAA
GAGCTCCTCACCTCCTTTGAAGGATCCTGA

Peptide Sequence

PEP ID

XP_016469894.1
PEP Infomation

PREDICTED: oxysterol-binding protein-related protein 2A isoform X2 [Nicotiana tabacum]
Sequence

MKQLSSLGRGKYSEWSTTESSDDIEKQELDEASDEEEANYLDANECFSELHLSGGSVVVD
HMASSTIDASAHAQVTRRTKLPDPVEKEKGVSLWSMIKDNVGKDLTRVCLPVYFNEPLSS
LQKCFEDLEYSYLLDRAYEHGKSGNSLLRILNVAAFAVSGYASTEGRNCKPFNPLLGETF
EADFPEKGIRFFSEKVSHHPTLIACHCEGRGWKFWADSNLKSKFWGRSIQLDPVGTLTLE
FDDGEIFQWSKVTTSIYNLILGKIYCDHHGIMHIRGNHQNSCKLKFKEPSIIERNPHQVH
GFVEDVSGKKVATLFGKWNENMYYMNGEWTSKPKDLSDSALLWTRNKPPLNLTRYNLSSF
AITLNELTPGLEEKLPPTDSRLRPDQRHLENGEYDKANSEKLRLETRQRMSRKLQENGWR
PRWFQREGEDGTFRYTGGYWEAREMGTWDGCPNIFGEIDQELLTSFEGS

Transcript Sequence

Gene sequence data has not been registered.